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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888145.1_cds_XP_016442688.1_37925
CDS Infomation

[gene=LOC107768094] [db_xref=GeneID:107768094] [protein=uncharacterized protein At1g04910-like isoform X2] [protein_id=XP_016442688.1] [location=complement(join(23168..23473,23572..23812,23912..24237,24411..24554,24640..24760,24908..24996,25215..25285,25446..25539,25653..25739,25955..26344))] [gbkey=CDS]
Sequence

ATGGGGAAAAAAGGGTCTCCTAGAGGTCGTCGAGTGGAGAACCAGGAATTAGATGTATCA
TTTGGGGTTAAAGAACATGAATTTCGAAGTTTAGATATGCAACACGGAGGTGATCCTCCT
CTAGGAAGAAGGTTATCAGGGGGAGATTACAATTGGGACAAAGTTGTTTTGTCCAAAGGG
TTGAAAAATGATTCTGTTAAGTTCACTCCTTTTAAAGGAGTTCATGTTGGGAAGAGGCAA
ATGTGGTGGCTGCATAGACATATTAGGTCTATAGTTTTCACAATTTTGTTAATGGGCTTT
CTTTTCCTTTTAGATTCTCTTGTATGCTTTATTTTTGACCCCGCAATGCTTCAGAATAAT
TTTTCTTTACAAGGCTCAAGTAAGACCAAGGTGGGAATGATAGAGAAGACTGAAAAAGAA
GGTCCAGTAAAGCTGCATGAAAGGTTGCTAAATCTGGCTGCTGCTTCTCTTGCTGAGAGA
GAGTTTAAGCAAGAGTCATCAAAGTTATGGGAGGAGCCATACCCTCAGGCATCATCTTGG
AAACCTTGTGCAGATAAAACTAGTCCACAAGGGAAACCTAGAAACATCACTGGCTATATA
CTGATCAGCGCAAATGGAGGACTAAATCAACAAAGAGTTGCTGTCTGCAATGCTGTTGCT
GTAGCATCTCTCCTAAATGCCACTTTGGTCATTCCCAAGTTTCTTTATAGCAATGTCTGG
AAGGATCCTAGCCAGTTCGGGGATATATATCAAGAAGACTATTTCTTGGATATGTTGAAG
GATGAAGTTAATATTATAAAGGAGCTCCCTCCTAATCTGAAATTACTTGATGTAGAAGCA
GCTGGAAGTCTTATAACTGATGCAGATCTCTCAAAGGAGGCTACACCTGATGAATACATT
AAGAAGATACTTCCCCTCCTCTTACGCAATCGAGTTGTTCACTTTTTAGGATATGGAAAT
AGACTCGGCTTTGACCCATTGCCATATGAACTTCAGAGACTAAGGTGCAAGTGCAACTTC
CATGCCTTAAAGTTTGTGCCAAAGATCCAAAAAAGGGGTTCTTTACTGGTTAGGCGGATT
CGGAGATATGATTTTGCAAGGAGCACATTGGATAAGCAACTTCTTGGAAACTTAATGCCG
CGTGTTGACCATAGTGCAGCAGAAGGCCCTTCCAAGTACCTTGCTTTGCATTTAAGGTTT
GAGATTGATATGGTGGCCTACTCTATGTGTGAATTTGGTGGTGGAGAAACTGAGAGAAGG
GAATTGCAAACTTATCGACAAGTCCATTTTCCTTTACTTCTTGAGCGTCTTAAGGAATCA
AAGTCTTATTCTCCAGAGGAGCTAAGAAGGATGGGCAAATGTCCATTGACACCAGAAGAA
GCAGCACTAGTTCTCGCTGGCCTTGGTTTCAAACATGGAACATACATCTATCTTGCTGGT
TCCGACATATATGGAGGTCAATCAAGAATGCAAGCTTTAACTACCCTCTATCCCAACCTA
GTGACCAAGGAAAATCTTCTCTCACCAAGTGAACTCGCGCCATTTAGAAACTTTTCTTCT
CAACTTGCAGCATTGGACTTCATTGCATGTGCAACATCCGATGTATTTGCAATAACAGAC
TCGGGCAGTCAGCTATCATCCCTTGTGTCAGGGTTCAGAACATATTATGGTGGTGGTCAT
GCTCCCACGTTGAGGCCTAGCAAGAAGAGGCTTGCTGCAATTTTGTCAAGAAATAAGACC
ATAGGATGGAACAGTTTCGAGGAGAAGATCCGGAAGATGATTGATGAAGGTCAGAGAGTG
CAGGTACGAGGCTTTGGTCGTAGTATTTATCGACACCCCAGATGCAAAGAGTGCATGTGC
AGGCATTAG

Peptide Sequence

PEP ID

XP_016442688.1
PEP Infomation

PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Nicotiana tabacum]
Sequence

MGKKGSPRGRRVENQELDVSFGVKEHEFRSLDMQHGGDPPLGRRLSGGDYNWDKVVLSKG
LKNDSVKFTPFKGVHVGKRQMWWLHRHIRSIVFTILLMGFLFLLDSLVCFIFDPAMLQNN
FSLQGSSKTKVGMIEKTEKEGPVKLHERLLNLAAASLAEREFKQESSKLWEEPYPQASSW
KPCADKTSPQGKPRNITGYILISANGGLNQQRVAVCNAVAVASLLNATLVIPKFLYSNVW
KDPSQFGDIYQEDYFLDMLKDEVNIIKELPPNLKLLDVEAAGSLITDADLSKEATPDEYI
KKILPLLLRNRVVHFLGYGNRLGFDPLPYELQRLRCKCNFHALKFVPKIQKRGSLLVRRI
RRYDFARSTLDKQLLGNLMPRVDHSAAEGPSKYLALHLRFEIDMVAYSMCEFGGGETERR
ELQTYRQVHFPLLLERLKESKSYSPEELRRMGKCPLTPEEAALVLAGLGFKHGTYIYLAG
SDIYGGQSRMQALTTLYPNLVTKENLLSPSELAPFRNFSSQLAALDFIACATSDVFAITD
SGSQLSSLVSGFRTYYGGGHAPTLRPSKKRLAAILSRNKTIGWNSFEEKIRKMIDEGQRV
QVRGFGRSIYRHPRCKECMCRH

Transcript Sequence

Gene sequence data has not been registered.